96 Well PCB Design

I replaced the placeholder electrode field with per-well WE/RE/CE islands and added three separate SMB-style footprints with isolated shell nets. I’m verifying the read-back and updating the project notes now.
Worked for 7 mins 59 sec
Thought for 3 mins 16 sec — Updating todos
4/5 Verify layout geometry and DRC-relevant issues

Remove/disable current row-bar placeholder electrodes and 1x3 header

Add GPT per-well WE/RE/CE electrode geometry on 9 mm pitch

Add three SMB connector footprints with isolated shell pads

Verify layout geometry and DRC-relevant issues

Update project specification with the corrected per-well design

Thought for 20 sec
Read layout.
Read layout.
Read schematic.
Thought for 46 sec — Fixing visualization issues
Editing layout rules.
Thought for 10 sec — Verifying disabled images
Read layout.
Thought for 24 sec
Read layout.

Refine this doc
Ask about this doc
Project Specification
Status: Draft / architecture review
Project Overview
Design a manufacturable 96-well electrode plate PCB that replaces a plastic well plate for low-voltage electrolysis experiments in buffer/saline. The current target is a 96-well FR4-based plate with three global electrical channels: shared working electrode, shared reference or pseudo-reference electrode, and shared counter electrode.
The design should ultimately produce schematic, PCB layout, 3D/mechanical visualization, and manufacturing outputs that can be checked in KiCad or a PCB viewer.
Intended Use
  • Laboratory prototype for performing parallel electrolysis reactions in 96 wells.
  • Electrical readout is not required; experiment readout is expected to be color change.
  • Wetted environment: buffer/saline.
  • The board is not intended for medical use or sterilization-critical use.
  • Preferred manufacturer: PCBWay.
What the Device Should Do
  • Provide 96 liquid wells or 96 gasketed reaction areas.
  • Expose three electrode types per well to liquid:
    • Working electrode, globally shared across all wells.
    • Reference or pseudo-reference electrode, globally shared across all wells.
    • Counter electrode, globally shared across all wells.
  • Keep non-electrode copper/traces isolated from liquid by solder mask or mechanical sealing.
  • Support a future AAA-powered controller that applies approximately 0.1 V to 1.5 V DC in 0.1 V increments.
  • Keep expected total current below about 1 mA unless later testing changes the requirement.
Main Features
  • 8 x 12 well array.
  • Approximate ANSI/SBS/Bio-Rad style plate footprint.
  • 9.00 mm well pitch preferred unless the mechanical/sealing approach requires adjustment.
  • Hard gold target on exposed electrodes, user preference: 20 microinch hard gold if PCBWay supports it for this geometry.
  • A1 to H12 labeling.
  • Off-board connection through three robust contacts/connectors for WE, RE, and CE.
  • Two mechanical variants should be considered:
    1. Preferred manufacturable prototype: flat electrode PCB plus gasket/O-ring or top well plate.
    2. Experimental monolithic version: thick PCB with controlled-depth machined wells.
System Architecture

Diagram


"Future AAA Controller\n0.1 V to 1.5 V DC" "3 Channel Plate Connector" "Shared Working Electrode Net" "Shared Reference or Pseudo Reference Net" "Shared Counter Electrode Net" "96 Well Electrode Array" "Buffer or Saline Wells"
Hardware Subsystems
Electrode Plate
  • 96 repeated electrode cells.
  • Each cell should expose only the intended electrode metals to liquid.
  • Preferred top geometry per user direction:
    • Working electrode: annular or large edge-region feature, about 1 mm width.
    • Reference electrode: annular or large edge-region feature, about 1 mm width.
    • Counter electrode: central circular pad, target diameter 2 mm or 3 mm, intended for later silver paint deposition.
  • The exact ordering of the two annuli must be finalized before layout because it affects reference proximity and sealing.
Electrical Distribution
  • Only three nets are required: WE_GLOBAL, RE_GLOBAL, CE_GLOBAL.
  • Because current is very low, full internal planes are not electrically necessary, but large pours/busses may be useful for symmetry, low resistance, and easier review.
  • A 4-layer stack is preferred for the main design.
  • Avoid vias inside wetted regions unless they are filled/capped and protected.
Connector Interface
  • User suggested SMB connectors.
  • Engineering preference: use either three SMB connectors for robust coax-style lab wiring, or a compact keyed 3-pin connector plus test pads if cost/space matters.
  • Connector choice should be finalized when the companion AAA regulator/controller is designed.
Interfaces and Connections

Table


InterfaceDirectionRequirement
WE_GLOBALController to plateShared working electrode net across all wells
RE_GLOBALController to plateShared reference or pseudo-reference net across all wells
CE_GLOBALController to plateShared counter electrode net across all wells
Mechanical wellsLiquid to plate96 isolated reaction volumes
LabelsUser visualA1 to H12 marking
Power and Runtime Expectations
  • External controller not yet designed.
  • Future power source: AAA battery.
  • Future output range: 0.1 V to 1.5 V DC, 0.1 V increments.
  • Current target: below 1 mA total.
  • No onboard active electronics are currently required on the passive electrode plate.
Power Tree and Power Budget

Diagram


"AAA Battery" "Future Adjustable Regulator" "Current Limit or Series Protection" "96 Well Plate\nWE RE CE"
Preliminary budget:

Table


LoadVoltageCurrent TargetNotes
96-well electrode array0.1 V to 1.5 V DC<1 mA totalShared global channels, no individual well readout
Manufacturing and Assembly Expectations
  • Preferred fab: PCBWay.
  • Maximum layer count: 4 layers.
  • Preferred material: FR4.
  • Overall thickness target: less than 8 mm.
  • User originally targeted about 6 mm total thickness.
  • Hard gold target: 20 microinch if available and compatible with selective electrode exposure.
  • User suggested 4 mil trace/space and 0.3 mm vias; these are reasonable as initial layout constraints, but the design is mechanically/electrochemically limited rather than trace-width limited.
  • Blind/buried vias are allowed by user but should be avoided for cost and reliability.
Physical Design Expectations
Reference Dimensions Found
Bio-Rad HSP9601 page dimensions:

Table


FeatureValue
Overall length127.76 mm
Overall width85.48 mm
Overall height16.06 mm
Well pitch9.00 mm
Well opening diameter5.46 mm
Well depth14.81 mm
A1 offset from left edge14.38 mm
A1 offset from top edge11.24 mm
Claude/KiCad dummy file dimensions inspected:

Table


FeatureValue / Observation
Board thickness6 mm
Board outlineAbout 127.76 mm x 85.48 mm with one 5 mm chamfer
Well grid8 x 12, 9 mm pitch
A1 coordinate equivalentMatches Bio-Rad offsets if board origin is shifted
Electrode netsOnly CENTER and RING, not three electrode channels
Layer count2 copper layers, not requested 4-layer architecture
ViasVia placed at every center electrode, directly in wetted area
Missing featuresNo third electrode, no well cavity definition, no connector, no current limiting/test strategy
Mechanical Variants
Preferred Variant A: Flat PCB plus gasket/O-ring/top plate
  • Use a relatively normal PCB thickness such as 1.6 mm to 2.4 mm unless a thicker stiffener is required.
  • Electrode cells are exposed on the top face.
  • Wells are created by a gasket sheet, O-rings, or separate machined plate clamped above the PCB.
  • This avoids raw machined FR4 sidewalls contacting saline.
  • This is the preferred first manufacturable route.
Experimental Variant B: Monolithic thick PCB with blind wells
  • Use 5 mm to 6.4 mm thick FR4, still below 8 mm total.
  • CNC/control-depth machine wells 2 mm to 4 mm deep.
  • Keep internal copper far away from well sidewalls.
  • Require fab confirmation before ordering.
  • Risk: raw FR4 sidewalls and machining debris contact liquid unless sealed.
Important Design Decisions
  • Rebuild cleanly rather than repair the Claude/KiCad dummy.
  • Use the Claude/KiCad dummy mainly for dimensions and labels.
  • Treat the requested three channels as global nets, not per-well independent channels.
  • Prefer a flat/gasketed first prototype over monolithic machined FR4 wells because saline exposure of raw FR4 is a major risk.
  • Document the reference electrode as a pseudo-reference unless Ag/AgCl chemistry is added.
  • Counter electrode can be a central pad intended for silver paint deposition, but this should be validated chemically.
Open Risks and Questions
  1. Electrode ordering: which annulus is working and which is reference should be finalized.
  2. Reference electrode chemistry: gold reference is a pseudo-reference; Ag/AgCl is better if a stable reference matters.
  3. Surface finish: PCBWay must confirm hard gold thickness, selective plating limitations, nickel underlayer, and saline exposure suitability.
  4. Wet FR4 risk: monolithic CNC wells expose raw FR4 unless sealed.
  5. Sealing: 96 isolated wells require uniform compression and leak testing.
  6. Connector choice: three SMBs are possible but bulky; a keyed 3-pin connector may be cheaper and easier.
  7. Current limiting: future controller should include current limiting; the passive plate should at least include test pads and possibly optional series resistors if integrated.
  8. Prototype strategy: a 3 x 3 or 4 x 4 coupon is strongly recommended before ordering the full 96-well version.
Assumptions
  • SBS-style 9 mm pitch is acceptable.
  • Bio-Rad outer footprint dimensions are the mechanical starting point.
  • Total current target is less than 1 mA for the whole array, not per well.
  • The design is for short-duration lab prototype testing, not production biomedical use.
  • User wants outputs viewable/checkable in KiCad eventually.
Change Notes
  • Initial specification created from the user answers and research review.
  • Project renamed from draft placeholder to 96-Well Electrode Plate.
  • The attached KiCad dummy was inspected and found useful for Bio-Rad-like outline/pitch, but not suitable electrically or mechanically as-is.
  • Rebuild started in Flux: created WE_GLOBAL, RE_GLOBAL, and CE_GLOBAL nets; added a 3-pin Molex 0022232031 prototype connector J1; configured a 127.76 mm x 85.48 mm Bio-Rad-style board outline with a 4-layer stackup; placed the 96-well electrode field on 9.00 mm pitch.
  • Current electrode implementation for review: CE is 96 individual 2.5 mm circular exposed SMD pads, one per well. WE and RE are implemented as shared 1.0 mm wide horizontal exposed row bars above and below each well row, respectively. This is a manufacturable flat-gasket prototype simplification of the requested annular WE/RE concept and should be reviewed before routing/export.
  • Routing is intentionally not complete yet. The current checkpoint is placement/geometry review before adding copper interconnect traces or distribution planes.
  • Project Overview

  • Intended Use

  • What the Device Should Do

  • Main Features

  • System Architecture

  • Hardware Subsystems

  • Electrode Plate

  • Electrical Distribution

  • Connector Interface

  • Interfaces and Connections

  • Power and Runtime Expectations

  • Power Tree and Power Budget

  • Manufacturing and Assembly Expectations

  • Physical Design Expectations

  • Reference Dimensions Found

  • Mechanical Variants

  • Important Design Decisions

  • Open Risks and Questions

  • Assumptions

  • Change Notes

Assets

Assets are files uploaded to this project which can be used in various ways.

96-Well Electrode Plate thumbnail
Manufacturable 96-well FR4 electrode plate with shared working, reference, and counter electrode channels, intended for low-voltage electrolysis in buffer/saline and compatible with a later AAA-powered controller.

Properties

Properties describe core aspects of the project.

Pricing & Availability

Distributor

Qty 1

Controls