I've now replaced every "Power Net Portal" component with a standard "Net Portal" while keeping the designator VDD. This update should now have your VDD objects behave as standard Net Portals (i.e. not being excluded from BOM/PCB automatically).
Please refresh your project view or schematic to verify the changes. Let me know if you need any further modifications.
Wirelessly connects nets on schematic. Used to organize schematics and separate functional blocks. To wirelessly connect net portals, give them same designator. #portal
Wirelessly connects power nets on schematic. Identical to the net portal, but with a power symbol. Used to organize schematics and separate functional blocks. To wirelessly connect power net portals, give them the same designator. #portal #power